Embden-Meyerhof-Parnas pathway - PMC

José M. Pastor, Nuno Borges, Juan P. Pagán, Sara Castaño-Cerezo, Laszlo N. Csonka, Bradley W. Goodner, Kathryn A. Reynolds, Luís G. Gonçalves, Montserrat Argandoña, Joaquín J. Nieto, Carmen Vargas, Vicente Bernal, Manuel Cánovas

Microb Cell Fact. 2019; 18: 134. Published online 2019 Aug 13. doi: 10.1186/s12934-019-1178-x

PMCID:: PMC6692947

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Genome sequences of Arthrobacter spp. that use a modified sulfoglycolytic Embden–Meyerhof–Parnas pathway

Arashdeep Kaur, Phillip L. van der Peet, Janice W.-Y. Mui, Marion Herisse, Sacha Pidot, Spencer J. Williams

Arch Microbiol. 2022; 204(3): 193. Published online 2022 Feb 24. doi: 10.1007/s00203-022-02803-2

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The Inactivation of Enzymes Belonging to the Central Carbon Metabolism Is a Novel Mechanism of Developing Antibiotic Resistance

Teresa Gil-Gil, Fernando Corona, José Luis Martínez, Alejandra Bernardini

mSystems. 2020 May-Jun; 5(3): e00282-20. Published online 2020 Jun 2. doi: 10.1128/mSystems.00282-20

PMCID:: PMC8534728

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Carbohydrate Metabolism in Archaea: Current Insights into Unusual Enzymes and Pathways and Their Regulation

Christopher Bräsen, Dominik Esser, Bernadette Rauch, Bettina Siebers

Microbiol Mol Biol Rev. 2014 Mar; 78(1): 89–175. doi: 10.1128/MMBR.00041-13

PMCID:: PMC3957730

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Flux Connections Between Gluconate Pathway, Glycolysis, and Pentose–Phosphate Pathway During Carbohydrate Metabolism in Bacillus megaterium QM B1551

Julie A. Wushensky, Tracy Youngster, Caroll M. Mendonca, Ludmilla Aristilde

Front Microbiol. 2018; 9: 2789. Published online 2018 Nov 21. doi: 10.3389/fmicb.2018.02789

PMCID:: PMC6262346

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In Vivo Thermodynamic Analysis of Glycolysis in Clostridium thermocellum and Thermoanaerobacterium saccharolyticum Using ¹³C and ²H Tracers

Tyler B. Jacobson, Travis K. Korosh, David M. Stevenson, Charles Foster, Costas Maranas, Daniel G. Olson, Lee R. Lynd, Daniel Amador-Noguez

mSystems. 2020 Mar-Apr; 5(2): e00736-19. Published online 2020 Mar 17. doi: 10.1128/mSystems.00736-19

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Cofactor Specificity of Glucose-6-Phosphate Dehydrogenase Isozymes in Pseudomonas putida Reveals a General Principle Underlying Glycolytic Strategies in Bacteria

Daniel Christoph Volke, Karel Olavarría, Pablo Iván Nikel

mSystems. 2021 Mar-Apr; 6(2): e00014-21. Published online 2021 Mar 16. doi: 10.1128/mSystems.00014-21

PMCID:: PMC8546961

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Metabolomics analysis reveals Embden Meyerhof Parnas pathway activation and flavonoids accumulation during dormancy transition in tree peony

Tao Zhang, Yanchao Yuan, Yu Zhan, Xinzhe Cao, Chunying Liu, Yuxi Zhang, Shupeng Gai

BMC Plant Biol. 2020; 20: 484. Published online 2020 Oct 23. doi: 10.1186/s12870-020-02692-x

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Remodeling of Carbon Metabolism during Sulfoglycolysis in Escherichia coli

Janice W.-Y. Mui, David P. De Souza, Eleanor C. Saunders, Malcolm J. McConville, Spencer J. Williams

Appl Environ Microbiol. 2023 Feb; 89(2): e02016-22. Published online 2023 Feb 2. doi: 10.1128/aem.02016-22

PMCID:: PMC9972972

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Proton Transport Chains in Glucose Metabolism: Mind the Proton

Dirk Roosterman, Wolfgang Meyerhof, Graeme S. Cottrell

Front Neurosci. 2018; 12: 404. Published online 2018 Jun 15. doi: 10.3389/fnins.2018.00404

PMCID:: PMC6014028

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Induction of a Futile Embden-Meyerhof-Parnas Pathway in Deinococcus radiodurans by Mn: Possible Role of the Pentose Phosphate Pathway in Cell Survival

Y.-M. Zhang, T.-Y. Wong, L.-Y. Chen, C.-S. Lin, J.-K. Liu

Appl Environ Microbiol. 2000 Jan; 66(1): 105–112. doi: 10.1128/aem.66.1.105-112.2000

PMCID:: PMC91792

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Regulation of Embden–Meyerhof–Parnas (EMP) Pathway and Tricarboxylic Acid (TCA) Cycle Concerning Aberrant Chilling Injury Behavior in Postharvest Papaya (Carica papaya L.)

Lijin Huang, Shoukui Tao, Yi Zhu, Yonggui Pan, Zhengke Zhang, Zhiqian Yu, Yezhen Chen

Int J Mol Sci. 2023 Sep; 24(18): 13898. Published online 2023 Sep 9. doi: 10.3390/ijms241813898

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Role of Intracellular Carbon Metabolism Pathways in Shigella flexneri Virulence

E. A. Waligora, C. R. Fisher, N. J. Hanovice, A. Rodou, E. E. Wyckoff, S. M. Payne

Infect Immun. 2014 Jul; 82(7): 2746–2755. doi: 10.1128/IAI.01575-13

PMCID:: PMC4097621

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New mechanisms for bacterial degradation of sulfoquinovose

Yifeng Wei, Yang Tong, Yan Zhang

Biosci Rep. 2022 Oct 28; 42(10): BSR20220314. Published online 2022 Oct 21. doi: 10.1042/BSR20220314

PMCID:: PMC9594981

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Compositional and Metabolic Responses of Autotrophic Microbial Community to Salinity in Lacustrine Environments

Yun Fang, Jun Liu, Jian Yang, Geng Wu, Zhengshuang Hua, Hailiang Dong, Brian P. Hedlund, Brett J. Baker, Hongchen Jiang

mSystems. 2022 Jul-Aug; 7(4): e00335-22. Published online 2022 Jul 12. doi: 10.1128/msystems.00335-22

PMCID:: PMC9426519

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Fig. 2

Proposed sulfoglycolytic Embden–Meyerhof–Parnas (sulfo-EMP) pathway for Arthrobacter spp. a Gene cluster encoding the sulfo-EMP pathway for Arthrobacter sp. AK04. b Gene cluster encoding the sulfo-EMP pathway for Arthrobacter sp. AK01. c Proposed sulfo-EMP pathway for Arthrobacter spp. d Comparison with EMP pathway for E. coli K12

Genome sequences of Arthrobacter spp. that use a modified sulfoglycolytic Embden–Meyerhof–Parnas pathway

Arch Microbiol. 2022;204(3):193.
FIGURE 7.

EDEMP cycle of P. putida KT2440. The architecture of central carbon metabolism is shown along the key elements belonging to the Entner-Doudoroff pathway (in green), the Embden-Meyerhof-Parnas pathway (in purple, operating in the gluconeogenic direction), and the pentose phosphate pathway (in red). Reactions downward to pyruvate are indicated with a wide shaded arrow. G6P, Glc-6-P; F6P, Fru-6-P.

Pseudomonas putida KT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways

J Biol Chem. 2015 Oct 23;290(43):25920-25932.
Fig. 1Fatty acid biosynthetic pathway and the structures of cassette and plasmid for PTA expression. (A) Fatty acid synthesis pathway. Solid line: the native pathway; dashed line: the introduced pathway. EMP: Embden–Meyerhof–Parnas pathway (glycolysis pathway); PPP: pentose phosphate pathway. FPK: fructose6-phosphate phosphoketolase; XPK: xylulose 5-phosphate phosphoketolase. (B) The structures of cassette and plasmid for PTA expression.

Expression of phosphotransacetylase in Rhodosporidium toruloides leading to improved cell growth and lipid production

RSC Adv. 2018 Jul 2;8(43):24673-24678.
Figure 1

Basic metabolic pathway for Candida tropicalis CICC1779-Dyd. EMP, embden-meyerhof-parnas pathway; PPP, pentose phosphate pathway; G3P, glyceraldehyde 3-phosphate; OAA, oxaloacetic acid.

Fermentation Process and Metabolic Flux of Ethanol Production from the Detoxified Hydrolyzate of Cassava Residue

Front Microbiol. 2017;8:1603.